TNMplot: differential gene expression analysis in Tumor, Normal and Metastatic tissues

The pan-cancer analysis page displays the expression range for a selected gene across all tissues in all available normal and tumor RNA Seq data.

Select a gene

Siginificant differences by Mann-Whitney U test are marked with red*
In case of low expression values we suggest to directly compare tumor to normal

Database setup:
TNMplot includes 56,938 unique multilevel quality controlled samples:
Genechip from GEO: 3,691 normal, 29,376 tumor and 453 metastasis
RNA-seq from GTex: 11,215 normal
RNA-seq from TCGA: 730 normal, 9,886 tumor and 394 metastasis
RNA-seq from TARGET: 12 normal, 1,180 tumor and 1 metastasis

Gene overview:

How to cite:
manuscript submitted for publication
Copyright (C):
Department of Bioinformatics,
Semmelweis University
2020

Check our other webtools: http://www.kmplot.com ; http://www.rocplot.org ; http://www.mutarget.com

RNA-Seq data
Gene chip data

The Normal and Tumor analysis page provides detailed analysis in multiple datasets for a selected gene in a selected tissue type.

Choose a gene